Jalview's installers were built with the install4j multi-platform installer builder and gradle.
Thanks to ej-technologies for granting a free install4j license to the Jalview Open Source Project. Then: open a terminal and type: conda config -add channels defaults
To install via conda, first download Miniconda for your platform. Install via CondaĪ Jalview conda package is also available (tested on OSX and Linux) thanks to the great folk over at BioConda Alternatively, up to date versions of Jalview designed for command line use are also available via conda and homebrew.
The Version Archive provides links to builds for earlier versions. If you need to install a specific version and have an existing Java installation then we recommend downloading the Jalview Executable Jar (see table above). If you need the source, then please download the Jalview 2.11.2.3 Source Tarball. To see what's new, view the Jalview 2.11.2.3 Release Notes.
View all platforms Other ways to install Jalview jar file This requires existing Java installation and can be launched via Select the latest JRE folder (JRE6 or JRE7 or jre1.8_*).Jalview executable.If you do not see this, select Program Files instead. The Java Web Start application JNLP file references the WebSphere JRE 6.0 which we provide via a URL from the same server at which the JNLP file is downloaded. Tap or double-click Program Files (x86).Tap or double-click on Local Disk (C:) in the left column (located under “Computer”).If the JNLP file is web based, you will need the IcedTea browser extension. If you do not see Java Web Start Launcher listed, tap or click More options then Look for another app on this PC. Ubuntu has OpenJRE in its repositories, or you can download and install Oracle JRE.
JNLP files will now open, by default, with Java Web Start Get project updates, sponsored content from our select partners, and more.Double click the latest jre folder (example: jre7, jre1.8_191, etc).If you do not have a Java folder here, you will want to go to and download the latest version before continuing with these steps.)
SSL certificates that cannot be validated when logging in and downloading the KVM viewer.